Hi After running simulations, I want to extract simulation running time (from 0 to 20s, with defined time step,around 2000 numbers in array) as an array. Because I want to work on outputs and change their scales and then plot them with time array to have accurate results. Could you help me to make this? A hint could be so helpful. thanks
Hey try this. Will help you extract your time and then separate your data into a list format rather than the default dictionary. Once you have this, you can plot it with Matplotlibs. Let me know how you go
import dyntools
# Run dyntools to extract the data
chnfobj = dyntools.CHNF(os.path.join(folder, outfile))
sh_ttl, ch_id, ch_data = chnfobj.get_data()
# Extract time as a variable
time = ch_data['time']
# Number of channels, (-1 as 'time' is represented in channel data)
count = len(ch_id) - 1
# Extract channel data
data = [ch_data[x + 1] for x in xrange(count)]
Asked: 2016-01-11 23:50:48 -0500
Seen: 3,506 times
Last updated: Feb 19 '16
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