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Unfortunately the conversion of data from DIgSILENT PowerFactory to PSS/E is not perfect. The first thing you should check after the conversion is that the power flow results match up in PowerFactory and PSS/E. Then, check that all of your dynamic models have been converted. Note that a DYR file created by PowerFactory will not include entries for dynamic models that are not found in the PSS/E library. Since you have 50 generators, you can check them one-by-one to see if all of the dynamic data has been converted. If all of the data has successfully converted then you might consider reducing the time step in PSS/E, and see if that helps.
