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If you're sure your dynamic model data is correct then you can use ierr = set_disable_run(0) to disable the simulation option setting that precludes dynamic simulation runs in the event there are fatal errors in the model data.
The automatic Zsource reconciliation should work fine and in my experience doesn't result in fatal errors though. Try running the DOCU command in data checking mode on your dynamic data. Check the output for any suspicious parameters or look for red colored cells in your dynamic data when it is loaded in the PSSE GUI. (Red colored cells indicate a fatal error in your dynamic data)
